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  5. Zm00001e036492_P001

Zm00001e036492_P001 (Zm00001e036492)


Aliases : Zm00001e036492

Description : Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum (sp|p62981|rs27a_soltu : 129.0)


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036492_P001
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Als_g08770 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09276 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31640 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33943 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51919 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58521 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08633 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cre07.g322100 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g53321 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19694 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g22941 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426807g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.04 OrthoFinder output from all 47 species
MA_115394g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
MA_5869456g0010 UBQ11 Polyubiquitin 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pp3c4_11430V3.1 UBQ14, Pp3c4_11430 polyubiquitin 10 0.04 OrthoFinder output from all 47 species
Sam_g11446 No alias UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06392 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29049 UBQ14 UBQ ubiquiTin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g46317 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
No external refs found!