Aliases : PDCB5, Zm00001e037118
Description : PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana (sp|q9m2k6|pdcb5_arath : 122.0)
Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00163410 | PDCB5,... | PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00092p00035570 | evm_27.TU.AmTr_v1... | Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT4G13600 | No alias | Carbohydrate-binding X8 domain superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G61130 | PDCB1 | plasmodesmata callose-binding protein 1 | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g28583 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g25236 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g08617 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g21538 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09349 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene08830.t1 | Aspi01Gene08830 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g09344 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G108400.1 | Ceric.04G108400 | not classified & original description: pacid=50630211... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.15G059500.1 | Ceric.15G059500 | not classified & original description: pacid=50640649... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21552 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g52112 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g10392 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g17985 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021386001 | No alias | Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_00481 | No alias | Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_10965 | No alias | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04122 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g14015 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g56789 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_210389g0010 | No alias | PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g18020 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g05623 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g42066 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0038.g012023 | No alias | not classified & original description: CDS=866-1510 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0205.g025725 | No alias | not classified & original description: CDS=1-396 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24668 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g46748 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g058080.3.1 | Solyc04g058080 | Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g091920.3.1 | Solyc09g091920 | PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g13221 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012946 | X8 | 34 | 109 |
| No external refs found! |
