Zm00001e037542_P001 (Zm00001e037542)


Aliases : Zm00001e037542

Description : Pentatricopeptide repeat-containing protein At4g16470 OS=Arabidopsis thaliana (sp|o23491|pp315_arath : 367.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e037542_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272900 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.01 OrthoFinder output from all 47 species
Adi_g004462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009247 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17504 OTP81 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g24034 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g03203 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06136 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07390 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g14757 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15782 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18758 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39900 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18627.t1 Aspi01Gene18627 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12399 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.24G026700.1 Ceric.24G026700 not classified & original description: pacid=50628649... 0.02 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.02 OrthoFinder output from all 47 species
Dcu_g17231 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g21154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g22855 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g26930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g11470.1 LOC_Os01g11470 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Len_g04197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05438 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07368 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02310 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g15751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g40819 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g57976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03488 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13243 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g14861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15312 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15474 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15704 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15705 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g29797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13232 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30840 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g49216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55202 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g64055 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002140 No alias ssDNA-binding protein *(OSB) & original description: CDS=75-2237 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008151 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g03800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16664 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g19790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19797 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g27497 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo100621 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo118230 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Smo92456 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo96927 EMB2758 Pentatricopeptide repeat-containing protein At3g24000,... 0.01 OrthoFinder output from all 47 species
Solyc01g081560.2.1 Solyc01g081560 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Spa_g06686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16630 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17686 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g24631 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13752 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 203 250
IPR002885 Pentatricopeptide_repeat 100 150
No external refs found!