Zm00001e037887_P001 (ATHEXP BETA 1.4,...)


Aliases : ATHEXP BETA 1.4, ATEXPB2, EXPB2, Zm00001e037887

Description : Expansin-B3 OS=Oryza sativa subsp. japonica (sp|q336t5|expb3_orysj : 366.0)


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e037887_P001
Cluster HCCA: Cluster_559

Target Alias Description ECC score Gene Family Method Actions
AT4G17030 ATHEXP BETA 3.1,... expansin-like B1 0.04 OrthoFinder output from all 47 species
Aop_g13450 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03743.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03745.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03746.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03747.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40020.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40383.t1 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G000500.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.02G091400.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.17G024200.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G039800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G039900.1 ATEXPA10,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G040100.1 ATEXPA10,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G040200.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G040300.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G040400.1 Ceric.17G040400 not classified & original description: pacid=50618134... 0.03 OrthoFinder output from all 47 species
Ceric.17G040500.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G040800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G041200.1 EXP15, ATEXPA15,... not classified & original description: pacid=50618023... 0.05 OrthoFinder output from all 47 species
Ceric.17G041400.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.17G041500.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G041600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G041700.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G042000.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G042100.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G042200.1 ATEXPA10,... alpha-class expansin & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.17G042300.1 ATEXPA10,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G042400.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.17G042500.1 ATEXPA10,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z225900.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Gb_06139 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Gb_07435 EXPA8, ATHEXP... alpha-class expansin 0.1 OrthoFinder output from all 47 species
Solyc04g081870.4.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc08g077910.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 184 265
IPR009009 RlpA-like_DPBB 91 171
No external refs found!