Zm00001e038987_P001 (Zm00001e038987)


Aliases : Zm00001e038987

Description : platform ATPase (CDC48)


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038987_P001
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Adi_g014923 CIP111 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01451 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41549 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_179420g0010 emb1354, CDC48C Cell division control protein 48 homolog C... 0.03 OrthoFinder output from all 47 species
MA_26837g0010 CIP111 Calmodulin-interacting protein 111 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003338 CDC4_N-term_subdom 107 188
IPR041569 AAA_lid_3 474 515
IPR041569 AAA_lid_3 750 790
IPR004201 Cdc48_dom2 208 272
IPR003959 ATPase_AAA_core 322 451
IPR003959 ATPase_AAA_core 595 728
No external refs found!