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  5. Zm00001e039018_P001

Zm00001e039018_P001 (VAMP726, ATVAMP726,...)


Aliases : VAMP726, ATVAMP726, Zm00001e039018

Description : R-SNARE component VAMP721/VAMP722 of SNARE cell-plate vesicle fusion complex. VAMP7-type R-type SNARE longin protein


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039018_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g012928 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Adi_g088704 SAR1, ATVAMP722, VAMP722 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Als_g31575 VAMP726, ATVAMP726 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Cba_g15943 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Ceric.27G008700.1 VAMP727,... R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
LOC_Os03g06960.1 VAMP726,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.09 OrthoFinder output from all 47 species
LOC_Os12g44250.1 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
Len_g48886 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Mp8g09990.1 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
Pnu_g09066 VAMP726, ATVAMP726 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001719 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Sam_g38844 No alias R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Smo164037 ATVAMP721,... Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Solyc01g066940.3.1 ATVAMP725,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
Solyc09g091610.3.1 VAMP726,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.04 OrthoFinder output from all 47 species
Solyc12g098180.3.1 VAMP726,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.06 OrthoFinder output from all 47 species
Spa_g24602 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001388 Synaptobrevin-like 130 216
IPR010908 Longin_dom 33 107
No external refs found!