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  5. Zm00001e039637_P001

Zm00001e039637_P001 (FAD2, Zm00001e039637)


Aliases : FAD2, Zm00001e039637

Description : omega-3/omega-6 fatty acid desaturase


Gene families : OG0001837 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001837_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039637_P001
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Aev_g02163 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Als_g37061 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Als_g50821 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene43571.t1 FAD2, Aspi01Gene43571 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene43584.t1 FAD2, Aspi01Gene43584 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Dac_g24880 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Ehy_g22864 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Ehy_g26118 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01025364001 FAD2 Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
Gb_21050 FAD2 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
LOC_Os02g48560.1 FAD2, LOC_Os02g48560 omega-3/omega-6 fatty acid desaturase 0.06 OrthoFinder output from all 47 species
LOC_Os07g23410.1 FAD2, LOC_Os07g23410 omega-3/omega-6 fatty acid desaturase 0.08 OrthoFinder output from all 47 species
LOC_Os07g23430.1 FAD2, LOC_Os07g23430 omega-3/omega-6 fatty acid desaturase 0.08 OrthoFinder output from all 47 species
Len_g14321 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Len_g49348 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
MA_20551g0010 FAD2 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
Msp_g27488 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Ore_g22007 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Pnu_g15311 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Pnu_g32690 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000739 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Smo163663 FAD2 Lipid metabolism.fatty acid synthesis.fatty acid... 0.02 OrthoFinder output from all 47 species
Solyc04g040120.1.1 FAD2, Solyc04g040120 omega-3/omega-6 fatty acid desaturase 0.05 OrthoFinder output from all 47 species
Solyc04g040130.1.1 FAD2, Solyc04g040130 omega-3/omega-6 fatty acid desaturase 0.05 OrthoFinder output from all 47 species
Solyc12g045035.1.1 FAD2, Solyc12g045035 omega-3/omega-6 fatty acid desaturase 0.05 OrthoFinder output from all 47 species
Solyc12g049030.1.1 FAD2, Solyc12g049030 omega-3/omega-6 fatty acid desaturase 0.07 OrthoFinder output from all 47 species
Solyc12g100230.1.1 FAD2, Solyc12g100230 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
Solyc12g100250.3.1 FAD2, Solyc12g100250 omega-3/omega-6 fatty acid desaturase 0.03 OrthoFinder output from all 47 species
Spa_g11252 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Tin_g04492 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Zm00001e023386_P002 FAD2, Zm00001e023386 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species
Zm00001e042261_P001 FAD2, Zm00001e042261 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR021863 FAS_N 20 65
IPR005804 FA_desaturase_dom 87 348
No external refs found!