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  5. Zm00001e039740_P001

Zm00001e039740_P001 (TUB9, Zm00001e039740)


Aliases : TUB9, Zm00001e039740

Description : Tubulin beta-7 chain OS=Oryza sativa subsp. japonica (sp|p37832|tbb7_orysj : 117.0)


Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039740_P001
Cluster HCCA: Cluster_324

Target Alias Description ECC score Gene Family Method Actions
Adi_g015560 TUB8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019982 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100099 TUB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100745 TUB8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101044 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Adi_g103468 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Als_g26306 TUB9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26674 TUB1 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene08571.t1 TUB6, Aspi01Gene08571 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 47 species
Aspi01Gene15212.t1 TUB6, Aspi01Gene15212 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene19826.t1 TUB6, Aspi01Gene19826 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene31254.t1 TUB2, Aspi01Gene31254 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35881.t1 TUB6, Aspi01Gene35881 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 47 species
Aspi01Gene49065.t1 TUB2, Aspi01Gene49065 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene61960.t3 TUB6, Aspi01Gene61960 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63081.t1 TUB6, Aspi01Gene63081 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Azfi_s0678.g081838 TUB6 not classified & original description: CDS=1-1224 0.01 OrthoFinder output from all 47 species
Cba_g15540 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dac_g14315 TUB4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g05390 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dcu_g06899 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 47 species
GSVIVT01024825001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Len_g08236 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 47 species
Pnu_g04503 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008095 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022789 TUB6 not classified & original description: CDS=157-1053 0.01 OrthoFinder output from all 47 species
Sam_g08880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40899 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.01 OrthoFinder output from all 47 species
Solyc03g025730.3.1 TUB8, Solyc03g025730 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 1 72
No external refs found!