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  5. Zm00001e040018_P001

Zm00001e040018_P001 (Zm00001e040018)


Aliases : Zm00001e040018

Description : pectin methylesterase


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040018_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.01 OrthoFinder output from all 47 species
Aev_g37035 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01890.t1 Aspi01Gene01890 pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene67011.t1 Aspi01Gene67011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0033.g024992 No alias pectin methylesterase & original description: CDS=226-1431 0.02 OrthoFinder output from all 47 species
Azfi_s0113.g046004 No alias pectin methylesterase & original description: CDS=5-1309 0.02 OrthoFinder output from all 47 species
Azfi_s0188.g056807 No alias pectin methylesterase & original description: CDS=1-903 0.01 OrthoFinder output from all 47 species
Dac_g11820 No alias EC_3.1 hydrolase acting on ester bond & original... 0.01 OrthoFinder output from all 47 species
Dac_g17627 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g08073 QRT1 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09632 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g38524 No alias EC_3.1 hydrolase acting on ester bond & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010557 No alias pectin methylesterase & original description: CDS=267-1394 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015086 No alias pectin methylesterase & original description: CDS=460-1611 0.01 OrthoFinder output from all 47 species
Sam_g38210 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g50211 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10437 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 121 413
No external refs found!