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  5. Zm00001e040499_P001

Zm00001e040499_P001 (Zm00001e040499)


Aliases : Zm00001e040499

Description : RING-v-class E3 ligase


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040499_P001
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00139440 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00170p00024360 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G06330 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G59000 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g33633 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15074 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0293.g063480 No alias E3 ubiquitin ligase & original description: CDS=497-1888 0.03 OrthoFinder output from all 47 species
Cba_g68167 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G009300.1 Ceric.15G009300 E3 ubiquitin ligase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g14801 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19756 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10273 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020801001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os02g06920.2 LOC_Os02g06920 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
LOC_Os04g01490.1 LOC_Os04g01490 RING-v-class E3 ligase 0.08 OrthoFinder output from all 47 species
Len_g27849 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436661g0020 No alias RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
MA_352312g0010 No alias RING-v-class E3 ligase 0.05 OrthoFinder output from all 47 species
MA_9139232g0010 No alias RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Mp7g19060.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g11364 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26175 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g06087 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009961 No alias E3 ubiquitin ligase & original description: CDS=391-1818 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023697 No alias not classified & original description: CDS=460-1119 0.02 OrthoFinder output from all 47 species
Solyc11g069350.2.1 Solyc11g069350 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Spa_g06347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15096 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 242 290
No external refs found!