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  5. Zm00001e040905_P001

Zm00001e040905_P001 (Zm00001e040905)


Aliases : Zm00001e040905

Description : RNA editing factor (SLO2)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040905_P001

Target Alias Description ECC score Gene Family Method Actions
AT2G37320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 OrthoFinder output from all 47 species
AT3G05240 MEF19 mitochondrial editing factor 19 0.07 OrthoFinder output from all 47 species
GSVIVT01008656001 No alias Pentatricopeptide repeat-containing protein At5g50990... 0.03 OrthoFinder output from all 47 species
LOC_Os06g12510.1 LOC_Os06g12510 Pentatricopeptide repeat-containing protein At5g15300... 0.12 OrthoFinder output from all 47 species
LOC_Os09g24680.1 LOC_Os09g24680 Pentatricopeptide repeat-containing protein At1g74600,... 0.14 OrthoFinder output from all 47 species
MA_110266g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_412g0010 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_445076g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 292 318
IPR002885 Pentatricopeptide_repeat 430 453
IPR002885 Pentatricopeptide_repeat 56 76
IPR002885 Pentatricopeptide_repeat 530 555
IPR002885 Pentatricopeptide_repeat 84 107
IPR002885 Pentatricopeptide_repeat 215 263
IPR002885 Pentatricopeptide_repeat 348 395
IPR002885 Pentatricopeptide_repeat 456 502
No external refs found!