Aliases : Zm00001e040924
Description : Putative pentatricopeptide repeat-containing protein At5g08490 OS=Arabidopsis thaliana (sp|q9fnn9|pp370_arath : 618.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e040924_P001 | |
| Cluster | HCCA: Cluster_515 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g004345 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004463 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g007512 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g007789 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g023974 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034364 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034832 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g048224 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067209 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067932 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g098110 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03728 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04477 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g16090 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g16270 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18510 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g26680 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Aob_g37107 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene01906.t1 | Aspi01Gene01906 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene14876.t1 | OTP80, Aspi01Gene14876 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene65851.t1 | Aspi01Gene65851 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22994 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g36746 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03331 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12874 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g53095 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003168 | CRR22 | not classified & original description: CDS=1-2031 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0321.g027231 | No alias | substrate adaptor of SCF E3 ubiquitin ligase complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g19925 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 111 | 133 |
| IPR002885 | Pentatricopeptide_repeat | 583 | 612 |
| IPR002885 | Pentatricopeptide_repeat | 554 | 580 |
| IPR002885 | Pentatricopeptide_repeat | 135 | 187 |
| IPR002885 | Pentatricopeptide_repeat | 679 | 727 |
| IPR002885 | Pentatricopeptide_repeat | 242 | 286 |
| IPR002885 | Pentatricopeptide_repeat | 345 | 392 |
| No external refs found! |
