Aliases : Zm00001e041053
Description : component Sm-D1 of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex
Gene families : OG0003223 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003223_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G07590 | No alias | Small nuclear ribonucleoprotein family protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g009378 | No alias | component *(Sm-D1) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077290 | No alias | component *(Sm-D1) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06290 | No alias | component *(Sm-D1) of U1/U2/U4/U5-associated Sm... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000754.23 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g24843 | No alias | component *(Sm-D1) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g32409 | No alias | component *(Sm-D1) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01014776001 | No alias | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g39444.1 | LOC_Os04g39444 | component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g36818 | No alias | component *(Sm-D1) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
| MA_466601g0010 | No alias | component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00077 | No alias | component *(Sm-D1) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g42470 | No alias | component *(Sm-D1) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g084310.4.1 | Solyc06g084310 | component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... | 0.11 | OrthoFinder output from all 47 species | |
| Tin_g02947 | No alias | component *(Sm-D1) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23233 | No alias | component *(Sm-D1) of U1/U2/U4/U5-associated Sm... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | LSM_dom_euk/arc | 2 | 62 |
| No external refs found! |
