Aliases : ATGH9A2, KOR2, Zm00001e041149
Description : KOR-type cellulose synthase endo-1,4-beta-glucanase
Gene families : OG0001763 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001763_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e041149_P001 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g07872 | ATGH9A1, IRX2,... | cellulose synthase endo-1,4-beta-glucanase *(KOR) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04747 | ATGH9A1, IRX2,... | cellulose synthase endo-1,4-beta-glucanase *(KOR) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g30715 | ATGH9A1, IRX2,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g05344 | ATGH9A1, IRX2,... | cellulose synthase endo-1,4-beta-glucanase *(KOR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene12771.t1 | ATGH9A1, IRX2,... | cellulose synthase endo-1,4-beta-glucanase *(KOR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene39487.t1 | ATGH9A1, IRX2,... | cellulose synthase endo-1,4-beta-glucanase *(KOR) &... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene48799.t1 | ATGH9A1, IRX2,... | cellulose synthase endo-1,4-beta-glucanase *(KOR) &... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_39316 | ATGH9A1, IRX2,... | KOR-type cellulose synthase endo-1,4-beta-glucanase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g41970.1 | ATGH9A1, IRX2,... | KOR-type cellulose synthase endo-1,4-beta-glucanase | 0.07 | OrthoFinder output from all 47 species | |
| MA_69345g0010 | ATGH9A1, IRX2,... | KOR-type cellulose synthase endo-1,4-beta-glucanase | 0.02 | OrthoFinder output from all 47 species | |
| Smo266522 | ATGH9A1, IRX2,... | Cell wall.cellulose.synthesis.cellulose synthase complex... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g10789 | ATGH9A1, IRX2,... | cellulose synthase endo-1,4-beta-glucanase *(KOR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03258 | ATGH9A1, IRX2,... | cellulose synthase endo-1,4-beta-glucanase *(KOR) &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g03453 | ATGH9A1, IRX2,... | cellulose synthase endo-1,4-beta-glucanase *(KOR) &... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007515_P001 | ATGH9A1, IRX2,... | KOR-type cellulose synthase endo-1,4-beta-glucanase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012080_P004 | ATGH9A1, IRX2,... | KOR-type cellulose synthase endo-1,4-beta-glucanase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEA | Interproscan |
| BP | GO:0005975 | carbohydrate metabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001701 | Glyco_hydro_9 | 112 | 588 |
| No external refs found! |
