Zm00001e041158_P001 (CDC48B, Zm00001e041158)

Aliases : CDC48B, Zm00001e041158

Description : Cell division control protein 48 homolog B OS=Arabidopsis thaliana (sp|q9zpr1|cd48b_arath : 634.0)

Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e041158_P001

Target	Alias	Description	ECC score	Gene Family Method
Adi_g014923	CIP111	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g19975	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g05302	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g09762	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os06g01980.1	emb1354, CDC48C,...	Cell division control protein 48 homolog C...	0.02	OrthoFinder output from all 47 species
Mp2g12350.1	emb1354, CDC48C	Calmodulin-interacting protein 111 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp2g13350.1	CIP111	Calmodulin-interacting protein 111 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp3g20500.1	CDC48B	Cell division control protein 48 homolog B...	0.03	OrthoFinder output from all 47 species
Ore_g19173	emb1354, CDC48C	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g13004	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g12429	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g13901	No alias	platform ATPase CDC48 & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	334	469
IPR003959	ATPase_AAA_core	63	198
IPR041569	AAA_lid_3	492	537
IPR041569	AAA_lid_3	223	255

External Links

No external refs found!