1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e041280_P002

Zm00001e041280_P002 (Zm00001e041280)


Aliases : Zm00001e041280

Description : GEM-like protein 4 OS=Arabidopsis thaliana (sp|q9fta0|geml4_arath : 179.0)


Gene families : OG0000595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000595_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041280_P002
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00120390 evm_27.TU.AmTr_v1... GEM-like protein 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT4G01600 No alias GRAM domain family protein 0.04 OrthoFinder output from all 47 species
AT5G08350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.07 OrthoFinder output from all 47 species
AT5G13200 No alias GRAM domain family protein 0.03 OrthoFinder output from all 47 species
AT5G23350 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.07 OrthoFinder output from all 47 species
AT5G23360 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.06 OrthoFinder output from all 47 species
AT5G23370 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 OrthoFinder output from all 47 species
Ala_g11767 GEM not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07158 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46794.t1 FIP1, Aspi01Gene46794 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52647.t1 FIP1, Aspi01Gene52647 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60753.t1 FIP1, Aspi01Gene60753 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G044500.1 FIP1, Ceric.32G044500 not classified & original description: pacid=50597787... 0.02 OrthoFinder output from all 47 species
Dac_g11079 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48555 GEM not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000958001 No alias GEM-like protein 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01012919001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01034391001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01034399001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01034412001 No alias GEM-like protein 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_22682 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g42440.1 LOC_Os02g42440 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g08860.1 FIP1, LOC_Os03g08860 GEM-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g52670.1 FIP1, LOC_Os03g52670 GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g44500.1 LOC_Os04g44500 GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g44510.1 LOC_Os04g44510 GEM-like protein 4 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
LOC_Os12g29400.1 LOC_Os12g29400 GEM-like protein 5 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Len_g08110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_84315g0010 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_99608g0020 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp7g17580.1 No alias GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g05605 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10245 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21095 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g098660.3.1 Solyc03g098660 GEM-like protein 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc08g078510.3.1 Solyc08g078510 GEM-like protein 5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc11g011580.2.1 Solyc11g011580 Putative GEM-like protein 8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g011600.3.1 Solyc11g011600 GEM-like protein 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g05448 FIP1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g05449 FIP1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20230 FIP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012085_P001 FIP1, Zm00001e012085 GLABRA2 expression modulator OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e039556_P001 Zm00001e039556 GEM-like protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004182 GRAM 139 260
No external refs found!