Aliases : RMA1, ATRMA1, Zm00001e041298
Description : RING-HC-class E3 ligase
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00264430 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00024p00165910 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g039742 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g072154 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g094710 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene35213.t1 | RMA1, ATRMA1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G009900.1 | Ceric.10G009900 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.18G044900.1 | Ceric.18G044900 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G045000.1 | Ceric.18G045000 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G045400.1 | Ceric.18G045400 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G045500.1 | Ceric.18G045500 | E3 ubiquitin ligase *(RMA/MUSE) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.19G012000.1 | Ceric.19G012000 | not classified & original description: pacid=50576245... | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000545.1 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g08588 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g18993 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01002819001 | RMA3, ATRMA3 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01014361001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_19856 | No alias | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g44820.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Len_g06314 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g15289 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g42450 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g26676 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62388 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0023.g008785 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-708 | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g109340.4.1 | Solyc01g109340 | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g078320.3.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g008400.1.1 | RMA1, ATRMA1,... | RING-HC-class E3 ligase | 0.07 | OrthoFinder output from all 47 species | |
| Solyc10g008410.1.1 | RMA1, ATRMA1,... | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g03199 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05542 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11747 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e003329_P001 | Zm00001e003329 | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018957 | Znf_C3HC4_RING-type | 68 | 118 |
| No external refs found! |
