Zm00001e041332_P001 (GATA5, Zm00001e041332)

Aliases : GATA5, Zm00001e041332

Description : transcription factor (GATA)

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e041332_P001
Cluster	HCCA: Cluster_70

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00136770	GATA4,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AT2G28340	GATA13	GATA transcription factor 13	0.03	OrthoFinder output from all 47 species
AT3G24050	GATA1	GATA transcription factor 1	0.03	OrthoFinder output from all 47 species
AT5G26930	GATA23	GATA transcription factor 23	0.02	OrthoFinder output from all 47 species
Ala_g09430	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g13178	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g13992	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g48899	GATA4	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g52135	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene07249.t1	GATA9, Aspi01Gene07249	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30025.t1	GATA5, Aspi01Gene30025	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64140.t1	GATA4, Aspi01Gene64140	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0078.g038241	GATA4	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.18G043900.1	GATA15, Ceric.18G043900	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g10781	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06602	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g08197	GATA1	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01017011001	GATA12	RNA biosynthesis.transcriptional activation.C2C2...	0.05	OrthoFinder output from all 47 species
GSVIVT01035614001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Gb_24250	GATA9	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Gb_25568	GATA20	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Gb_34837	GATA20	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
LOC_Os02g43150.1	GATA5, LOC_Os02g43150	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
LOC_Os04g45650.2	GATA5, LOC_Os04g45650	transcription factor (GATA)	0.07	OrthoFinder output from all 47 species
LOC_Os05g49280.1	GATA20, LOC_Os05g49280	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
LOC_Os10g32070.1	GATA1, LOC_Os10g32070	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
LOC_Os12g07120.1	GATA14, LOC_Os12g07120	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Len_g08386	GATA12	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g26280	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g02094	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g35809	GATA9	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g09526	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g14533	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09627	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000079	GATA9	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009072	GATA4	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016909	GATA9	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0192.g025334	GATA12	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025929	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Sam_g08124	No alias	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g39003	No alias	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g062760.4.1	HAN, MNP,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Solyc02g085190.2.1	HAN, MNP,...	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	358	392

External Links

No external refs found!

Zm00001e041332_P001 (GATA5, Zm00001e041332)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation