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  5. Zm00001e042088_P001

Zm00001e042088_P001 (RPL22, Zm00001e042088)


Aliases : RPL22, Zm00001e042088

Description : 50S ribosomal protein L22, chloroplastic OS=Zea mays (sp|p06589|rk22_maize : 146.0)


Gene families : OG0008579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042088_P001
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
ATCG00810 RPL22 ribosomal protein L22 0.04 OrthoFinder output from all 47 species
Aev_g00527 RPL22 component *(uL22c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Azfi_s0031.g024539 RPL22 not classified & original description: CDS=1-555 0.03 OrthoFinder output from all 47 species
Ceric.05G042500.1 RPL22, Ceric.05G042500 component *(uL22c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ceric.1Z020100.1 Ceric.1Z020100 component *(uL22c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.29G004500.1 RPL22, Ceric.29G004500 component *(uL22c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Dcu_g13089 RPL22 component *(uL22c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
LOC_Os04g16822.1 RPL22, LOC_Os04g16822 component psRPL22 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
LOC_Os08g15268.1 RPL22, LOC_Os08g15268 component psRPL22 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Lfl_g13571 RPL22 component *(uL22c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Msp_g00391 RPL22 component *(uL22c) of large plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Ore_g00408 RPL22 component *(uL22c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Smo137709 RPL22 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001063 Ribosomal_L22 42 94
No external refs found!