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  5. Zm00001e042161_P001

Zm00001e042161_P001 (PETA, Zm00001e042161)


Aliases : PETA, Zm00001e042161

Description : apocytochrome f component PetA of cytochrome b6/f complex


Gene families : OG0007601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042161_P001

Target Alias Description ECC score Gene Family Method Actions
ATCG00540 PETA photosynthetic electron transfer A 0.04 OrthoFinder output from all 47 species
Aev_g01305 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.06 OrthoFinder output from all 47 species
Als_g00738 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Aob_g01376 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Ceric.02G014700.1 PETA, Ceric.02G014700 apocytochrome f component *(PetA) of cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Ceric.05G050200.1 PETA, Ceric.05G050200 not classified & original description: pacid=50577900... 0.04 OrthoFinder output from all 47 species
Ceric.05G050300.1 PETA, Ceric.05G050300 apocytochrome f component *(PetA) of cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Ceric.16G018100.1 PETA, Ceric.16G018100 apocytochrome f component *(PetA) of cytochrome b6/f... 0.06 OrthoFinder output from all 47 species
Ceric.38G007000.1 PETA, Ceric.38G007000 apocytochrome f component *(PetA) of cytochrome b6/f... 0.05 OrthoFinder output from all 47 species
Dcu_g21017 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Gb_37933 PETA Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 137.0) 0.02 OrthoFinder output from all 47 species
Gb_41662 PETA Cytochrome f OS=Cycas taitungensis (sp|a6h5j1|cyf_cycta : 175.0) 0.02 OrthoFinder output from all 47 species
LOC_Os01g65902.1 PETA, LOC_Os01g65902 apocytochrome f component PetA of cytochrome b6/f complex 0.04 OrthoFinder output from all 47 species
LOC_Os02g24596.1 PETA, LOC_Os02g24596 apocytochrome f component PetA of cytochrome b6/f complex 0.03 OrthoFinder output from all 47 species
LOC_Os10g21290.1 PETA, LOC_Os10g21290 apocytochrome f component PetA of cytochrome b6/f complex 0.03 OrthoFinder output from all 47 species
Lfl_g06925 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.09 OrthoFinder output from all 47 species
Mp1g27760.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g43249 PETA apocytochrome f component *(PetA) of cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Sam_g03361 No alias apocytochrome f component *(PetA) of cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Smo236857 PETA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.07 OrthoFinder output from all 47 species
Solyc00g500020.1.1 PETA, Solyc00g500020 apocytochrome f component PetA of cytochrome b6/f complex 0.04 OrthoFinder output from all 47 species
Solyc00g500067.1.1 PETA, Solyc00g500067 apocytochrome f component PetA of cytochrome b6/f complex 0.04 OrthoFinder output from all 47 species
Solyc10g045220.1.1 PETA, Solyc10g045220 apocytochrome f component PetA of cytochrome b6/f complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
MF GO:0009055 electron transfer activity IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
CC GO:0031361 obsolete integral component of thylakoid membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
InterPro domains Description Start Stop
IPR002325 Cyt_f 202 305
IPR024094 Cyt_f_lg_dom 36 190
No external refs found!