Aliases : CLPP1, PCLPP, Zm00001e042466
Description : ATP-dependent Clp protease proteolytic subunit OS=Zea mays (sp|p26567|clpp_maize : 276.0)
Gene families : OG0005638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005638_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e042466_P001 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g08306 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08794 | CLPP1, PCLPP | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G041300.1 | CLPP1, PCLPP,... | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.38G007900.1 | CLPP1, PCLPP,... | EC_3.4 hydrolase acting on peptide bond (peptidase) &... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g15270.1 | CLPP1, PCLPP,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 1 | 112 |
| No external refs found! |
