Aliases : RPL22, Zm00001e042492
Description : component psRPL22 of large ribosomal subunit proteome
Gene families : OG0008579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008579_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e042492_P001 | |
| Cluster | HCCA: Cluster_140 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g00527 | RPL22 | component *(uL22c) of large plastid ribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G004500.1 | RPL22, Ceric.29G004500 | component *(uL22c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g13089 | RPL22 | component *(uL22c) of large plastid ribosomal-subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g13571 | RPL22 | component *(uL22c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e042144_P001 | RPL22, Zm00001e042144 | component psRPL22 of large ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0004177 | aminopeptidase activity | IEP | HCCA |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | HCCA |
| BP | GO:0006414 | translational elongation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| MF | GO:0016211 | ammonia ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001063 | Ribosomal_L22 | 1 | 96 |
| No external refs found! |
