Mp1g04290.1 (ATSUG1, RPT6A)

Aliases : ATSUG1, RPT6A

Description : regulatory component RPT6 of 26S proteasome

Gene families : OG0004338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004338_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp1g04290.1
Cluster	HCCA: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00217520	ATSUG1, RPT6A,...	Protein degradation.26S proteasome.regulatory...	0.02	OrthoFinder output from all 47 species
AT5G19990	ATSUG1, RPT6A	regulatory particle triple-A ATPase 6A	0.06	OrthoFinder output from all 47 species
AT5G20000	No alias	AAA-type ATPase family protein	0.04	OrthoFinder output from all 47 species
Aev_g07060	ATSUG1, RPT6A	regulatory component *(RPT6) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Azfi_s0290.g063325	ATSUG1, RPT6A	regulatory component *(RPT6) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Ceric.37G056200.1	ATSUG1, RPT6A,...	regulatory component *(RPT6) of 26S proteasome &...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000792.28	ATSUG1, RPT6A	Protein degradation.26S proteasome.regulatory...	0.11	OrthoFinder output from all 47 species
Cre04.g216600	ATSUG1, RPT6A	Protein degradation.26S proteasome.regulatory...	0.15	OrthoFinder output from all 47 species
Dcu_g04554	ATSUG1, RPT6A	regulatory component *(RPT6) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
GSVIVT01035767001	ATSUG1, RPT6A	Protein degradation.26S proteasome.regulatory...	0.04	OrthoFinder output from all 47 species
Gb_08346	ATSUG1, RPT6A	regulatory component RPT6 of 26S proteasome	0.07	OrthoFinder output from all 47 species
LOC_Os02g11050.1	ATSUG1, RPT6A,...	regulatory component RPT6 of 26S proteasome	0.11	OrthoFinder output from all 47 species
LOC_Os06g39870.1	ATSUG1, RPT6A,...	regulatory component RPT6 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Len_g15696	ATSUG1, RPT6A	regulatory component *(RPT6) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
MA_10427013g0010	ATSUG1, RPT6A	regulatory component RPT6 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Msp_g06734	ATSUG1, RPT6A	regulatory component *(RPT6) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Pp3c10_2600V3.1	ATSUG1, RPT6A,...	regulatory particle triple-A ATPase 6A	0.01	OrthoFinder output from all 47 species
Pp3c1_21950V3.1	ATSUG1, RPT6A,...	regulatory particle triple-A ATPase 6A	0.03	OrthoFinder output from all 47 species
Sam_g13407	No alias	regulatory component *(RPT6) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Solyc05g018570.3.1	ATSUG1, RPT6A,...	regulatory component RPT6 of 26S proteasome	0.09	OrthoFinder output from all 47 species
Solyc05g018590.3.1	ATSUG1, RPT6A,...	regulatory component RPT6 of 26S proteasome	0.05	OrthoFinder output from all 47 species
Zm00001e014515_P001	ATSUG1, RPT6A,...	regulatory component RPT6 of 26S proteasome	0.1	OrthoFinder output from all 47 species
Zm00001e024980_P001	ATSUG1, RPT6A,...	regulatory component RPT6 of 26S proteasome	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	HCCA
CC	GO:0005801	cis-Golgi network	IEP	HCCA
BP	GO:0009894	regulation of catabolic process	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0042176	regulation of protein catabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
CC	GO:1905368	peptidase complex	IEP	HCCA
CC	GO:1905369	endopeptidase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032501	Prot_ATP_ID_OB_C	76	131
IPR041569	AAA_lid_3	346	388
IPR003959	ATPase_AAA_core	189	322

External Links

No external refs found!

Mp1g04290.1 (ATSUG1, RPT6A)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation