Description : pre-60S ribosomal subunit assembly factor (NOP16)
Gene families : OG0005949 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005949_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp1g07200.1 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G02870 | No alias | FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g00767 | No alias | pre-60S ribosomal subunit assembly factor *(NOP16) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12294 | No alias | pre-60S ribosomal subunit assembly factor *(NOP16) &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0314.g064255 | No alias | pre-60S ribosomal subunit assembly factor *(NOP16) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g00402 | No alias | pre-60S ribosomal subunit assembly factor *(NOP16) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cre17.g726650 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07324 | No alias | pre-60S ribosomal subunit assembly factor *(NOP16) &... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_09459 | No alias | pre-60S ribosomal subunit assembly factor (NOP16) | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os05g30420.1 | LOC_Os05g30420 | pre-60S ribosomal subunit assembly factor (NOP16) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g00105 | No alias | pre-60S ribosomal subunit assembly factor *(NOP16) &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_16514g0010 | No alias | pre-60S ribosomal subunit assembly factor (NOP16) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g075030.3.1 | Solyc09g075030 | pre-60S ribosomal subunit assembly factor (NOP16) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031413_P001 | Zm00001e031413 | pre-60S ribosomal subunit assembly factor (NOP16) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019002 | Ribosome_biogenesis_Nop16 | 55 | 147 |
| No external refs found! |
