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  5. Mp1g07840.1

Mp1g07840.1


Description : component ARRS1 of ARPF2-ARRS1 complex


Gene families : OG0004436 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g07840.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00122560 evm_27.TU.AmTr_v1... Ribosome biogenesis regulatory protein homolog... 0.07 OrthoFinder output from all 47 species
AT2G37990 No alias ribosome biogenesis regulatory protein (RRS1) family protein 0.03 OrthoFinder output from all 47 species
Aop_g06676 No alias component *(ARRS1) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene48009.t1 Aspi01Gene48009 component *(ARRS1) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0570.g077851 No alias component *(ARRS1) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.12G016900.1 Ceric.12G016900 component *(ARRS1) of ARPF2-ARRS1 complex & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000215.62 No alias Ribosome biogenesis regulatory protein homolog... 0.05 OrthoFinder output from all 47 species
Cre01.g020950 No alias Ribosome biogenesis regulatory protein homolog... 0.25 OrthoFinder output from all 47 species
Dac_g03666 No alias component *(ARRS1) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01027072001 No alias Ribosome biogenesis regulatory protein homolog... 0.18 OrthoFinder output from all 47 species
Gb_25591 No alias component ARRS1 of ARPF2-ARRS1 complex 0.02 OrthoFinder output from all 47 species
Gb_41748 No alias component ARRS1 of ARPF2-ARRS1 complex 0.03 OrthoFinder output from all 47 species
LOC_Os04g58830.1 LOC_Os04g58830 component ARRS1 of ARPF2-ARRS1 complex 0.11 OrthoFinder output from all 47 species
Nbi_g06949 No alias component *(ARRS1) of ARPF2-ARRS1 complex & original... 0.02 OrthoFinder output from all 47 species
Pp3c3_32550V3.1 Pp3c3_32550 ribosome biogenesis regulatory protein (RRS1) family protein 0.02 OrthoFinder output from all 47 species
Sam_g29092 No alias component *(ARRS1) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Solyc12g006550.2.1 Solyc12g006550 component ARRS1 of ARPF2-ARRS1 complex 0.02 OrthoFinder output from all 47 species
Spa_g07664 No alias component *(ARRS1) of ARPF2-ARRS1 complex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e016688_P001 Zm00001e016688 component ARRS1 of ARPF2-ARRS1 complex 0.04 OrthoFinder output from all 47 species
Zm00001e025915_P002 Zm00001e025915 component ARRS1 of ARPF2-ARRS1 complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003911 DNA ligase (NAD+) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036265 RNA (guanine-N7)-methylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
BP GO:0070476 rRNA (guanine-N7)-methylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007023 Ribosom_reg 26 179
No external refs found!