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  5. Mp1g10070.1

Mp1g10070.1


Description : topoisomerase component TOP3b of TDRD3-TOP3B methyl-arginine reader complex. type-1A topoisomerase TOP3b


Gene families : OG0002141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g10070.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Als_g10803 AtTOP3alpha, TOP3A topoisomerase component *(TOP3-alpha) of RTR Holliday... 0.02 OrthoFinder output from all 47 species
Als_g59511 No alias type-1A topoisomerase TOP3b & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29065.t1 Aspi01Gene29065 type-1A topoisomerase TOP3b & original description: none 0.02 OrthoFinder output from all 47 species
Cre17.g725100 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
GSVIVT01026461001 AtTOP3alpha, TOP3A DNA topoisomerase 3-alpha OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g10015 AtTOP3alpha, TOP3A topoisomerase component *(TOP3-alpha) of RTR Holliday... 0.02 OrthoFinder output from all 47 species
Lfl_g10610 No alias type-1A topoisomerase TOP3b & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g097880.4.1 Solyc09g097880 topoisomerase component TOP3b of TDRD3-TOP3B... 0.02 OrthoFinder output from all 47 species
Tin_g13785 AtTOP3alpha, TOP3A topoisomerase component *(TOP3-alpha) of RTR Holliday... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003916 DNA topoisomerase activity IEA Interproscan
BP GO:0006265 DNA topological change IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013497 Topo_IA_cen 165 576
IPR006171 TOPRIM_domain 5 150
No external refs found!