1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp1g11770.1

Mp1g11770.1 (BBD1, ATBBD1)


Aliases : BBD1, ATBBD1

Description : Bifunctional nuclease 1 OS=Arabidopsis thaliana (sp|q9fws6|bbd1_arath : 311.0)


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g11770.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00133450 BBD1, ATBBD1,... Bifunctional nuclease 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G19660 No alias Wound-responsive family protein 0.08 OrthoFinder output from all 47 species
AT1G75380 BBD1, ATBBD1 bifunctional nuclease in basal defense response 1 0.03 OrthoFinder output from all 47 species
AT5G66050 No alias Wound-responsive family protein 0.03 OrthoFinder output from all 47 species
Aev_g43539 BBD1, ATBBD1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g01471 BBD1, ATBBD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G019300.1 BBD1, ATBBD1,... not classified & original description: pacid=50586572... 0.04 OrthoFinder output from all 47 species
Ceric.22G026600.1 Ceric.22G026600 not classified & original description: pacid=50614244... 0.05 OrthoFinder output from all 47 species
Dcu_g10487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21453 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10357 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01912 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58477 BBD1, ATBBD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g083310.3.1 Solyc02g083310 Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc04g080700.4.1 Solyc04g080700 Bifunctional nuclease 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc12g089220.3.1 BBD1, ATBBD1,... Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 128 242
No external refs found!