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  5. Mp1g12970.1

Mp1g12970.1 (SGR4, ZIG1, VTI1A,...)


Aliases : SGR4, ZIG1, VTI1A, ATVTI11, VTI11, ZIG, ATVTI1A

Description : VTI group Qb-type SNARE protein


Gene families : OG0002267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g12970.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g008512 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aob_g30123 ATVTI13, VTI13 Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aop_g25830 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001214 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Cre13.g577500 VTI12, VTI1B, ATVTI12 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
LOC_Os01g51120.1 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species
Len_g03643 ATVTI13, VTI13 Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Msp_g01840 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ore_g17846 ATVTI13, VTI13 Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pir_g01144 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pp3c11_5240V3.1 ATVTI13, VTI13,... Vesicle transport v-SNARE family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000290 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sam_g29467 No alias Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Tin_g43976 SGR4, ZIG1,... Qb-type VTI-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Zm00001e020013_P001 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.02 OrthoFinder output from all 47 species
Zm00001e027750_P001 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.06 OrthoFinder output from all 47 species
Zm00001e028148_P001 ATVTI13, VTI13,... VTI group Qb-type SNARE protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0019107 myristoyltransferase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 12 90
No external refs found!