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  5. Mp1g14200.1

Mp1g14200.1


Description : Reticulon-like protein B21 OS=Arabidopsis thaliana (sp|q56x72|rtnls_arath : 145.0)


Gene families : OG0003467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g14200.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00213680 evm_27.TU.AmTr_v1... Reticulon-like protein B18 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
AMTR_s00065p00202980 evm_27.TU.AmTr_v1... Reticulon-like protein B21 OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
AT2G20590 No alias Reticulon family protein 0.11 OrthoFinder output from all 47 species
AT4G28430 No alias Reticulon family protein 0.03 OrthoFinder output from all 47 species
Aev_g22301 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59860 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024361 No alias not classified & original description: CDS=126-2093 0.05 OrthoFinder output from all 47 species
Azfi_s0054.g033815 No alias not classified & original description: CDS=1-1470 0.03 OrthoFinder output from all 47 species
Cba_g05841 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G033400.1 Ceric.35G033400 not classified & original description: pacid=50581205... 0.03 OrthoFinder output from all 47 species
Dcu_g02951 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01586 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01020595001 No alias Reticulon-like protein B17 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
Gb_25024 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os02g19990.1 LOC_Os02g19990 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Lfl_g18628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_22853g0010 No alias Reticulon-like protein B21 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Nbi_g18960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007280 No alias not classified & original description: CDS=1-1662 0.05 OrthoFinder output from all 47 species
Solyc07g053700.4.1 Solyc07g053700 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g02418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09371 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g51972 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g30838 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e024730_P001 Zm00001e024730 Reticulon-like protein B17 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 386 538
No external refs found!