Aliases : ATHDA15, HDA15
Description : class-II histone deacetylase
Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g06072 | ATHDA5, HDA05, HDA5 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18380 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g01049 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g17859 | ATHDA5, HDA05, HDA5 | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g14691 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g29852 | ATHDA5, HDA05, HDA5 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g65397 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060221 | ATHDA15, HDA15 | class-II histone deacetylase & original description: CDS=93-1925 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g18820 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G066800.1 | ATHDA15, HDA15,... | class-II histone deacetylase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16605 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01843 | ATHDA5, HDA05, HDA5 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14604 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008242001 | ATHDA15, HDA15 | Chromatin organisation.histone modifications.histone... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g06980.1 | ATHDA15, HDA15,... | class-II histone deacetylase | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g05654 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08594 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g10819 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g17268 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g49320 | No alias | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07852 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g08286 | ATHDA15, HDA15 | class-II histone deacetylase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032874_P003 | ATHDA15, HDA15,... | class-II histone deacetylase | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004527 | exonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
| BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023801 | His_deacetylse_dom | 283 | 572 |
| No external refs found! |
