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  5. Mp1g23570.1

Mp1g23570.1 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : Probable starch synthase 4, chloroplastic/amyloplastic OS=Arabidopsis thaliana (sp|q0wvx5|ssy4_arath : 394.0)


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g23570.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00164200 ATSS3, SS3,... Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
AT5G65685 No alias UDP-Glycosyltransferase superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g25563 ATSS4, SS4, SSIV not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05131 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g02255 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0001.g000667 ATSS4, SS4, SSIV not classified & original description: CDS=177-2066 0.02 OrthoFinder output from all 47 species
Cba_g27648 ATSS4, SS4, SSIV not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g45424 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g01991 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08981 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g08672 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.01 OrthoFinder output from all 47 species
Gb_24148 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.01 OrthoFinder output from all 47 species
Len_g49747 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26184 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g10587 ATSS4, SS4, SSIV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16317 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g15347 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g09774 ATSS4, SS4, SSIV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27766 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10545 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 234 461
IPR001296 Glyco_trans_1 536 699
No external refs found!