Aliases : EDM2
Description : chromatin-associated epigenetic factor
Gene families : OG0001607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001607_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp2g00350.1 | |
| Cluster | HCCA: Cluster_15 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00055p00187070 | EDM2,... | Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g086263 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g33308 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15502 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g15466 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010405 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G022200.1 | EDM2, Ceric.32G022200 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g32283 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g24946.1 | EDM2, LOC_Os08g24946 | chromatin-associated epigenetic factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g12300.1 | EDM2, LOC_Os12g12300 | Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g02443 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06826 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g04823 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g13263 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g09289 | EDM2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09412 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromatin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g14839 | EDM2 | component *(EDM2) of ASI1-AIPP1-EDM2 chromaTin silencing... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011500_P001 | EDM2, Zm00001e011500 | Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0043486 | obsolete histone exchange | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0070070 | proton-transporting V-type ATPase complex assembly | IEP | HCCA |
| BP | GO:0070071 | proton-transporting two-sector ATPase complex assembly | IEP | HCCA |
| BP | GO:0070072 | vacuolar proton-transporting V-type ATPase complex assembly | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
