Aliases : ATRER1A
Description : Protein RER1A OS=Arabidopsis thaliana (sp|o48670|rer1a_arath : 228.0)
Gene families : OG0001450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001450_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp2g00750.1 | |
| Cluster | HCCA: Cluster_26 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00228520 | RER1B, ATRER1B,... | Protein RER1B OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| AT2G23310 | ATRER1C1 | Rer1 family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g016727 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g035506 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g053700 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g053701 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g16338 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g13389 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g03633 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g17316 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g36479 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020710.65 | ATRER1C1 | Protein RER1C OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g555350 | ATRER1A | Protein RER1C OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g11965 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07398 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17914 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g01640.1 | ATRER1A, LOC_Os01g01640 | Protein RER1A OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g21760.1 | ATRER1A, LOC_Os08g21760 | Protein RER1A OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g02670 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10202775g0010 | RER1B, ATRER1B | Protein RER1B OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_36826g0020 | RER1B, ATRER1B | Protein RER1B OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g10634 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g00759 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13874 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0055.g014474 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g13546 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g07053 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12646 | ATRER1A | membrane protein cargo receptor *(RER1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e017155_P001 | ATRER1A, Zm00001e017155 | Protein RER1A OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| BP | GO:0018279 | protein N-linked glycosylation via asparagine | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
| CC | GO:0048500 | signal recognition particle | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004932 | Rer1 | 20 | 179 |
| No external refs found! |
