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  5. Mp2g13520.1

Mp2g13520.1


Description : component psPSRP3 of small ribosomal subunit proteome


Gene families : OG0003343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g13520.1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00055110 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.12 OrthoFinder output from all 47 species
AT1G68590 No alias Ribosomal protein PSRP-3/Ycf65 0.34 OrthoFinder output from all 47 species
Adi_g023800 No alias component *(cS23) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Adi_g086977 No alias component *(cS23) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ala_g00515 No alias component *(cS23) of small plastid ribosomal-subunit... 0.13 OrthoFinder output from all 47 species
Als_g02788 No alias component *(cS23) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g28969 No alias component *(cS23) of small plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Aob_g07615 No alias component *(cS23) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Aob_g08130 No alias component *(cS23) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Aop_g00272 No alias component *(cS23) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Aspi01Gene46394.t1 Aspi01Gene46394 component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031601 No alias component *(cS23) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Cba_g32123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g68856 No alias component *(cS23) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.29G082200.1 Ceric.29G082200 component *(cS23) of small plastid ribosomal-subunit... 0.28 OrthoFinder output from all 47 species
Cre02.g083950 No alias Protein biosynthesis.organelle translation... 0.16 OrthoFinder output from all 47 species
Dcu_g00469 No alias component *(cS23) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dcu_g05305 No alias component *(cS23) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Dde_g08494 No alias component *(cS23) of small plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Ehy_g06384 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01031053001 No alias Protein biosynthesis.organelle translation... 0.24 OrthoFinder output from all 47 species
Gb_30016 No alias component psPSRP3 of small ribosomal subunit proteome 0.17 OrthoFinder output from all 47 species
LOC_Os04g38750.1 LOC_Os04g38750 component psPSRP3 of small ribosomal subunit proteome 0.23 OrthoFinder output from all 47 species
Len_g12700 No alias component *(cS23) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Len_g27723 No alias component *(cS23) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Lfl_g02667 No alias component *(cS23) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Lfl_g39341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432955g0010 No alias component psPSRP3 of small ribosomal subunit proteome 0.15 OrthoFinder output from all 47 species
MA_19834g0010 No alias component psPSRP3 of small ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
Nbi_g11062 No alias component *(cS23) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Ore_g05910 No alias component *(cS23) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Ore_g26894 No alias component *(cS23) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Pir_g18227 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pir_g43396 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c6_19070V3.1 Pp3c6_19070 Ribosomal protein PSRP-3/Ycf65 0.01 OrthoFinder output from all 47 species
Ppi_g18636 No alias component *(cS23) of small plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017327 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.12 OrthoFinder output from all 47 species
Sam_g23730 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g39979 No alias component *(cS23) of small plastid ribosomal-subunit... 0.01 OrthoFinder output from all 47 species
Solyc03g034190.3.1 Solyc03g034190 component psPSRP3 of small ribosomal subunit proteome 0.12 OrthoFinder output from all 47 species
Solyc05g009570.3.1 Solyc05g009570 component psPSRP3 of small ribosomal subunit proteome 0.2 OrthoFinder output from all 47 species
Spa_g01460 No alias component *(cS23) of small plastid ribosomal-subunit... 0.18 OrthoFinder output from all 47 species
Tin_g11701 No alias component *(cS23) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Tin_g12630 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e007903_P001 Zm00001e007903 component psPSRP3 of small ribosomal subunit proteome 0.01 OrthoFinder output from all 47 species
Zm00001e041019_P001 Zm00001e041019 component psPSRP3 of small ribosomal subunit proteome 0.34 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006924 Ribosomal_PSRP3/Ycf65 134 180
No external refs found!