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  5. Mp2g16690.1

Mp2g16690.1


Description : subfamily ABCG transporter


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g16690.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00021210 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT2G28070 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
Ala_g26096 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02591 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17529 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37216.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.30G013300.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G038400.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.33 ATATH4, ABCA5, ATH4 No description available 0.04 OrthoFinder output from all 47 species
Dac_g09671 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13604 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22000 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04812 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23849 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g42918 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08498 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46097 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09962 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28458 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g07670.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os09g29660.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g29291 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32037 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43002 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01723 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17205 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018711 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=1249-3375 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019973 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=1-2280 0.02 OrthoFinder output from all 47 species
Sam_g07489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10384 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e004489_P001 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e006437_P002 Zm00001e006437 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e033298_P002 ATWBC11, ABCG11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 138 287
IPR013525 ABC_2_trans 447 657
No external refs found!