1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp2g19910.1

Mp2g19910.1


Description : component SPT20/ADA5 of SAGA transcription co-activator complex


Gene families : OG0002206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002206_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp2g19910.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00266960 evm_27.TU.AmTr_v1... RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
AT1G72390 No alias CONTAINS InterPro DOMAIN/s: Spt20 family... 0.04 OrthoFinder output from all 47 species
Adi_g085780 No alias component *(SPT20/ADA5) of SAGA transcription... 0.03 OrthoFinder output from all 47 species
Adi_g117174 No alias component *(SPT20/ADA5) of SAGA transcription... 0.02 OrthoFinder output from all 47 species
Aev_g13851 No alias component *(SPT20/ADA5) of SAGA transcription... 0.02 OrthoFinder output from all 47 species
Ala_g27769 No alias component *(SPT20/ADA5) of SAGA transcription... 0.02 OrthoFinder output from all 47 species
Als_g02622 No alias component *(SPT20/ADA5) of SAGA transcription... 0.02 OrthoFinder output from all 47 species
Aob_g34090 No alias component *(SPT20/ADA5) of SAGA transcription... 0.03 OrthoFinder output from all 47 species
Aop_g10954 No alias component *(SPT20/ADA5) of SAGA transcription... 0.02 OrthoFinder output from all 47 species
Ceric.13G072900.1 Ceric.13G072900 component *(SPT20/ADA5) of SAGA transcription... 0.04 OrthoFinder output from all 47 species
Dac_g38696 No alias component *(SPT20/ADA5) of SAGA transcription... 0.02 OrthoFinder output from all 47 species
Dde_g05385 No alias component *(SPT20/ADA5) of SAGA transcription... 0.02 OrthoFinder output from all 47 species
GSVIVT01016716001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 OrthoFinder output from all 47 species
LOC_Os10g25200.1 LOC_Os10g25200 component SPT20/ADA5 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Lfl_g07703 No alias component *(SPT20/ADA5) of SAGA transcription... 0.02 OrthoFinder output from all 47 species
MA_10436298g0010 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species
MA_911375g0010 No alias component SPT20/ADA5 of SAGA transcription co-activator complex 0.06 OrthoFinder output from all 47 species
Nbi_g32360 No alias component *(SPT20/ADA5) of SAGA transcription... 0.05 OrthoFinder output from all 47 species
Ore_g37205 No alias component *(SPT20/ADA5) of SAGA transcription... 0.04 OrthoFinder output from all 47 species
Pir_g15131 No alias component *(SPT20/ADA5) of SAGA transcription... 0.04 OrthoFinder output from all 47 species
Sam_g07983 No alias component *(SPT20/ADA5) of SAGA transcription... 0.07 OrthoFinder output from all 47 species
Solyc06g063010.4.1 Solyc06g063010 component SPT20/ADA5 of SAGA transcription co-activator complex 0.03 OrthoFinder output from all 47 species
Spa_g49888 No alias component *(SPT20/ADA5) of SAGA transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000124 SAGA complex IEA Interproscan
MF GO:0003712 transcription coregulator activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021950 Spt20 164 294
No external refs found!