Description : component mtRPL17 of large ribosomal subunit proteome
Gene families : OG0002243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002243_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp2g23260.1 | |
| Cluster | HCCA: Cluster_22 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aspi01Gene15394.t1 | Aspi01Gene15394 | component *(bL17c) of large plastid ribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01026526001 | No alias | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g38580.1 | LOC_Os05g38580 | component mtRPL17 of large ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| Len_g00165 | No alias | component *(uL17m) of large mitoribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c12_10340V3.1 | Pp3c12_10340 | Ribosomal protein L17 family protein | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0048038 | quinone binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000456 | Ribosomal_L17 | 20 | 116 |
| No external refs found! |
