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  5. Mp3g07170.1

Mp3g07170.1


Description : component RPL35 of LSU proteome component


Gene families : OG0000495 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000495_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g07170.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00225520 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT2G39390 No alias Ribosomal L29 family protein 0.05 OrthoFinder output from all 47 species
AT3G09500 No alias Ribosomal L29 family protein 0.05 OrthoFinder output from all 47 species
AT3G55170 No alias Ribosomal L29 family protein 0.03 OrthoFinder output from all 47 species
AT5G02610 No alias Ribosomal L29 family protein 0.03 OrthoFinder output from all 47 species
Als_g56144 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g21832 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g23213 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g24019 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g71203 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0437.g069964 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g74059 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cba_g77930 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.10G004300.1 Ceric.10G004300 component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre14.g617900 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Dac_g01910 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dac_g29193 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g33187 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g43285 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dde_g13562 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dde_g45940 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ehy_g29494 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01005972001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01025050001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Gb_33813 No alias component RPL35 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os02g30050.1 LOC_Os02g30050 component RPL35 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Len_g05873 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
MA_10429159g0010 No alias component RPL35 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Nbi_g15763 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Pp3c3_2800V3.1 Pp3c3_2800 Ribosomal L29 family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014105 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g36756 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g47711 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo438324 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc04g010240.3.1 Solyc04g010240 component RPL35 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g07344 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Tin_g27506 No alias component *(uL29) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e008428_P002 Zm00001e008428 component RPL35 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e014607_P001 Zm00001e014607 component RPL35 of LSU proteome component 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001854 Ribosomal_L29/L35 8 63
No external refs found!