Description : no hits & (original description: none)
Gene families : OG0002255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002255_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp3g15600.1 | |
| Cluster | HCCA: Cluster_56 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g025967 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04679 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g63040.1 | LOC_Os03g63040 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09634 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g36304 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005991 | No alias | not classified & original description: CDS=568-1242 | 0.02 | OrthoFinder output from all 47 species | |
| Smo437809 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g053770.4.1 | Solyc05g053770 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g098463.1.1 | Solyc12g098463 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g25827 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006914 | autophagy | IEP | HCCA |
| CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | HCCA |
| CC | GO:1902554 | serine/threonine protein kinase complex | IEP | HCCA |
| CC | GO:1902911 | protein kinase complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
