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  5. Mp3g17350.1

Mp3g17350.1 (SPT)


Aliases : SPT

Description : transcription factor (bHLH)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp3g17350.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00250370 RHD6,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00184910 LRL1,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00127480 UNE10,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00110p00030150 UNE10,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G02340 HFR1, FBI1, REP1, RSF1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G03040 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G27740 RSL4 root hair defective 6-like 4 0.03 OrthoFinder output from all 47 species
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.02 OrthoFinder output from all 47 species
AT3G57800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.02 OrthoFinder output from all 47 species
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 OrthoFinder output from all 47 species
AT5G58010 LRL3 LJRHL1-like 3 0.02 OrthoFinder output from all 47 species
Adi_g056069 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06685 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08253 HEC2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09029 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23312 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39005 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ala_g08014 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10321 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00973 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01540 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g06024 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g09007 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g16212 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g28177 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g37127 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50421 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aob_g10628 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21168 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24196 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aob_g31617 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aop_g08607 HEC1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g41589 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g56154 BPEp, ZCW32, BPE, BPEub regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aop_g63732 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene00480.t1 Aspi01Gene00480 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04843.t2 LRL3, Aspi01Gene04843 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29543.t1 Aspi01Gene29543 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene33079.t1 UNE12, Aspi01Gene33079 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46366.t1 HEC2, Aspi01Gene46366 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66676.t2 Aspi01Gene66676 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Azfi_s0075.g037605 LRL3 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044857 SPT bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Azfi_s0289.g063291 RSL2 bHLH-type transcription factor & original description: CDS=1-1326 0.02 OrthoFinder output from all 47 species
Cba_g11398 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13645 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15802 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g25222 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27104 HEC2 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g34527 HEC2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G038900.1 LRL3, Ceric.04G038900 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.04G045500.1 Ceric.04G045500 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.08G020500.1 RSL2, Ceric.08G020500 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.12G021200.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.16G014000.1 RHD6, Ceric.16G014000 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.16G026700.1 Ceric.16G026700 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.17G001900.1 CIB1, Ceric.17G001900 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ceric.22G021400.1 CIB5, Ceric.22G021400 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ceric.22G036800.1 SPT, Ceric.22G036800 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.27G028300.1 SPT, Ceric.27G028300 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.32G068300.1 Ceric.32G068300 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.33G061700.1 SPT, Ceric.33G061700 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.34G030200.1 BPEp, ZCW32,... regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Dac_g07111 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Dac_g10732 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g41029 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08844 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12124 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05767 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ehy_g18466 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013553001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01020814001 SRL2, PIF4, AtPIF4 External stimuli response.light.red/far red light.PIF... 0.03 OrthoFinder output from all 47 species
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Gb_06182 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Gb_07156 PIF3, POC1, PAP3 transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
Gb_09709 SPT transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Gb_13550 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Gb_28850 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os02g55250.1 LRL3, LOC_Os02g55250 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os09g31300.1 LOC_Os09g31300 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os11g25560.1 LOC_Os11g25560 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Len_g19799 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36428 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g49441 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03024 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03405 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08868 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g21331 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Lfl_g39067 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_100071g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_158362g0010 CIB5 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
MA_167128g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_42080g0010 CIB1 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
MA_78485g0010 RSL4 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_83500g0010 HEC1 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_90272g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Msp_g01217 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Msp_g06098 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26946 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g15825 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19998 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31298 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07604 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pir_g16587 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17357 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38111 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Pnu_g08374 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33350 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60624 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ppi_g62088 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011925 HEC2 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0237.g026567 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Sam_g15799 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g26740 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo425336 LRL1 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Smo443113 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Solyc02g091440.2.1 RHD6, Solyc02g091440 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc04g077480.3.1 Solyc04g077480 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc12g010170.2.1 LRL1, Solyc12g010170 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc12g098620.2.1 Solyc12g098620 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Spa_g06107 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13574 HEC1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g33531 RHD6 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47270 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10179 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Tin_g11732 HEC1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005046_P003 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.02 OrthoFinder output from all 47 species
Zm00001e009823_P002 LRL1, Zm00001e009823 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e011084_P002 Zm00001e011084 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e015045_P002 Zm00001e015045 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e015584_P004 CIB1, Zm00001e015584 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e015610_P001 RHD6, Zm00001e015610 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e018003_P001 RSL2, Zm00001e018003 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e018857_P002 Zm00001e018857 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e023698_P001 LRL3, Zm00001e023698 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e025656_P001 RHD6, Zm00001e025656 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e034146_P001 LRL1, Zm00001e034146 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 537 583
No external refs found!