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  5. Mp4g05990.1

Mp4g05990.1 (RBCS1A)


Aliases : RBCS1A

Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g05990.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00061090 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Ala_g19484 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Aspi01Gene02941.t1 RBCS1A, Aspi01Gene02941 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Aspi01Gene15242.t1 RBCS1A, Aspi01Gene15242 small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Cba_g37481 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Cba_g39071 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Ceric.09G050700.1 RBCS1A, Ceric.09G050700 small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Ceric.09G050800.1 RBCS1A, Ceric.09G050800 small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Ceric.09G051100.1 RBCS1A, Ceric.09G051100 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Ceric.09G051300.1 RBCS1A, Ceric.09G051300 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Ceric.09G051400.1 RBCS1A, Ceric.09G051400 small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Ceric.09G051500.1 RBCS1A, Ceric.09G051500 small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Ceric.09G051700.1 RBCS1A, Ceric.09G051700 small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Ceric.25G070600.1 RBCS1A, Ceric.25G070600 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Dac_g44002 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Dde_g46369 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from all 47 species
Len_g48939 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Mp4g15070.1 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Mp7g08140.1 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Msp_g43345 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Ore_g35122 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Pir_g63731 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Pnu_g12024 No alias small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Pp3c19_1840V3.1 RBCS1A, Pp3c19_1840 Ribulose bisphosphate carboxylase (small chain) family protein 0.06 OrthoFinder output from all 47 species
Pp3c2_4100V3.1 RBCS1A, Pp3c2_4100 ribulose bisphosphate carboxylase small chain 1A 0.03 OrthoFinder output from all 47 species
Pp3c3_14510V3.1 RBCS1A, Pp3c3_14510 ribulose bisphosphate carboxylase small chain 1A 0.02 OrthoFinder output from all 47 species
Pp3c3_20140V3.1 RBCS1A, Pp3c3_20140 ribulose bisphosphate carboxylase small chain 1A 0.01 OrthoFinder output from all 47 species
Pp3c4_13260V3.1 RBCS1A, Pp3c4_13260 Ribulose bisphosphate carboxylase (small chain) family protein 0.03 OrthoFinder output from all 47 species
Ppi_g01698 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015406 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Sam_g23016 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Sam_g36381 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Smo147927 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Smo17395 RBCS1A Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Solyc02g085940.4.1 Solyc02g085940 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Spa_g19552 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Tin_g36825 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR000894 RuBisCO_ssu_dom 71 179
No external refs found!