Aliases : RBCS1A
Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer
Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp4g06040.1 | |
| Cluster | HCCA: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g19484 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene02941.t1 | RBCS1A, Aspi01Gene02941 | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene15242.t1 | RBCS1A, Aspi01Gene15242 | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g39071 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G051400.1 | RBCS1A, Ceric.09G051400 | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G070600.1 | RBCS1A, Ceric.25G070600 | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g44002 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46369 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g48939 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g15070.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g43345 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g35122 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63695 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63731 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g12024 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c19_1840V3.1 | RBCS1A, Pp3c19_1840 | Ribulose bisphosphate carboxylase (small chain) family protein | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c2_4100V3.1 | RBCS1A, Pp3c2_4100 | ribulose bisphosphate carboxylase small chain 1A | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c3_14510V3.1 | RBCS1A, Pp3c3_14510 | ribulose bisphosphate carboxylase small chain 1A | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c4_13260V3.1 | RBCS1A, Pp3c4_13260 | Ribulose bisphosphate carboxylase (small chain) family protein | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01698 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g32726 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g60704 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0061.g015406 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Smo147927 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Smo17395 | RBCS1A | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g36825 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | IEP | HCCA |
| MF | GO:0005199 | structural constituent of cell wall | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006553 | lysine metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009085 | lysine biosynthetic process | IEP | HCCA |
| BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | HCCA |
| BP | GO:0009664 | plant-type cell wall organization | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009733 | response to auxin | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
| MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0046451 | diaminopimelate metabolic process | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| No external refs found! |
