Aliases : DND1, ATCNGC2, CNGC2
Description : cyclic nucleotide-gated cation channel (CNGC)
Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp4g11640.1 | |
| Cluster | HCCA: Cluster_23 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00152360 | ATCNGC17,... | Solute transport.channels.VIC superfamily.cyclic... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g05813 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0301.g063721 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15401 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g05216 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g06536 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g37579 | DND1, ATCNGC2, CNGC2 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01025208001 | CNGC15, ATCNGC15 | Solute transport.channels.VIC superfamily.cyclic... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g36093 | No alias | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g50440 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g069580.2.1 | CNGC15,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005216 | monoatomic ion channel activity | IEA | Interproscan |
| BP | GO:0006811 | monoatomic ion transport | IEA | Interproscan |
| CC | GO:0016020 | membrane | IEA | Interproscan |
| BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| No external refs found! |
