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  5. Mp4g13890.1

Mp4g13890.1


Description : Putative F-box protein PP2-B12 OS=Arabidopsis thaliana (sp|q9flu7|p2b12_arath : 95.1)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g13890.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G09155 PP2-B15, AtPP2-B15 phloem protein 2-B15 0.02 OrthoFinder output from all 47 species
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.02 OrthoFinder output from all 47 species
AT2G02310 AtPP2-B6, PP2-B6 phloem protein 2-B6 0.02 OrthoFinder output from all 47 species
AT4G19850 ATPP2-A2, PP2-A2, PP2A2 lectin-related 0.02 OrthoFinder output from all 47 species
AT5G24560 AtPP2-B12, PP2-B12 phloem protein 2-B12 0.02 OrthoFinder output from all 47 species
AT5G52120 PP2-A14, AtPP2-A14 phloem protein 2-A14 0.02 OrthoFinder output from all 47 species
Aev_g07837 PP2-A11, AtPP2-A11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15955 AtPP2-B8, PP2-B8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g55000 PP2-A1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55185.t1 MEE66, Aspi01Gene55185 not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g56800.1 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g56820.1 MEE66, LOC_Os02g56820 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os12g03740.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Lfl_g41000 AtPP2-A13, PP2-A13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10435077g0010 PP2-B15, AtPP2-B15 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g08180.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp3g03850.1 AtPP2-B1, PP2-B1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g22930.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g26057 AtPP2-B1, PP2-B1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g100010.3.1 PP2-B15,... F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g083730.2.1 PP2-A15,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Solyc12g098200.2.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e016195_P001 AtPP2-B1,... F-box protein PP2-B1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e023618_P002 ATPP2-B11,... Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 352 509
IPR025886 PP2-like 87 243
No external refs found!