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  5. Mp4g23600.1

Mp4g23600.1


Description : NSA2 LSU processome maturation factor


Gene families : OG0003771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003771_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp4g23600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00185140 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder output from all 47 species
Als_g37980 No alias LSU processome maturation factor *(NSA2) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0059.g034517 No alias LSU processome maturation factor *(NSA2) & original... 0.12 OrthoFinder output from all 47 species
Ceric.07G100700.1 Ceric.07G100700 LSU processome maturation factor *(NSA2) & original... 0.1 OrthoFinder output from all 47 species
Cre12.g507300 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Dac_g42224 No alias LSU processome maturation factor *(NSA2) & original... 0.25 OrthoFinder output from all 47 species
Dde_g09563 No alias LSU processome maturation factor *(NSA2) & original... 0.04 OrthoFinder output from all 47 species
Gb_20609 No alias NSA2 LSU processome maturation factor 0.03 OrthoFinder output from all 47 species
LOC_Os07g47580.1 LOC_Os07g47580 NSA2 LSU processome maturation factor 0.08 OrthoFinder output from all 47 species
Len_g01146 No alias LSU processome maturation factor *(NSA2) & original... 0.07 OrthoFinder output from all 47 species
Len_g54661 No alias LSU processome maturation factor *(NSA2) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g20840 No alias LSU processome maturation factor *(NSA2) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g37110 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Msp_g01445 No alias LSU processome maturation factor *(NSA2) & original... 0.13 OrthoFinder output from all 47 species
Nbi_g03462 No alias LSU processome maturation factor *(NSA2) & original... 0.04 OrthoFinder output from all 47 species
Ore_g09249 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Pir_g00885 No alias LSU processome maturation factor *(NSA2) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g32827 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Smo402189 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
Spa_g00911 No alias LSU processome maturation factor *(NSA2) & original... 0.05 OrthoFinder output from all 47 species
Tin_g05409 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e010952_P001 Zm00001e010952 NSA2 LSU processome maturation factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 32 259
No external refs found!