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  5. Mp5g00930.1

Mp5g00930.1


Description : Probable F-box protein At4g22030 OS=Arabidopsis thaliana (sp|o65451|fb333_arath : 152.0)


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g00930.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00128270 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00129060 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g16127 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g03889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g39319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20983.t1 Aspi01Gene20983 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33945.t1 Aspi01Gene33945 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G060100.1 Ceric.17G060100 not classified & original description: pacid=50617754... 0.02 OrthoFinder output from all 47 species
Dcu_g20132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30200 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g19663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012688001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01012691001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g49204 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g17788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g080840.1.1 Solyc02g080840 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 94 394
No external refs found!