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  5. Mp5g01100.1

Mp5g01100.1


Description : Probable F-box protein At4g22030 OS=Arabidopsis thaliana (sp|o65451|fb333_arath : 124.0)


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g01100.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00128270 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00128640 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00067p00091510 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00085p00174790 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G04480 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.03 OrthoFinder output from all 47 species
Aev_g16127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g39319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34497.t1 Aspi01Gene34497 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34498.t1 Aspi01Gene34498 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34562.t1 Aspi01Gene34562 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34564.t1 Aspi01Gene34564 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0334.g065497 No alias not classified & original description: CDS=1-1488 0.02 OrthoFinder output from all 47 species
Cba_g13201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z240500.1 Ceric.1Z240500 not classified & original description: pacid=50576892... 0.03 OrthoFinder output from all 47 species
Ceric.33G013700.1 Ceric.33G013700 not classified & original description: pacid=50607125... 0.02 OrthoFinder output from all 47 species
Dcu_g20132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18339 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g30200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01012688001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01012691001 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
LOC_Os02g13220.1 LOC_Os02g13220 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g49204 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g29340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0213.g025971 No alias not classified & original description: CDS=1-1506 0.02 OrthoFinder output from all 47 species
Solyc02g080850.1.1 Solyc02g080850 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e014444_P001 Zm00001e014444 Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 96 393
No external refs found!