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  5. Mp5g05080.1

Mp5g05080.1 (RPS17, CS17, PRPS17)


Aliases : RPS17, CS17, PRPS17

Description : component psRPS17 of small ribosomal subunit proteome


Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp5g05080.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g13255 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g05225 emb1129 component *(uS17m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g47206 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Azfi_s0430.g069336 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.11G069100.1 Ceric.11G069100 component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dac_g17145 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Lfl_g00314 emb1129 component *(uS17m) of small mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Lfl_g10801 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
MA_10123473g0010 RPS17, CS17, PRPS17 component psRPS17 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Ore_g06145 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pp3c1_12860V3.1 RPS17, CS17,... ribosomal protein S17 0.03 OrthoFinder output from all 47 species
Solyc03g120630.4.1 RPS17, CS17,... component psRPS17 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Spa_g48114 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 54 121
No external refs found!