Aliases : ATPCNA1, PCNA1
Description : sliding clamp protein (PCNA)
Gene families : OG0002250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002250_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp5g08780.1 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G07370 | ATPCNA1, PCNA1 | proliferating cellular nuclear antigen 1 | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene44335.t1 | ATPCNA1, PCNA1,... | sliding clamp protein *(PCNA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene47926.t1 | ATPCNA1, PCNA1,... | sliding clamp protein *(PCNA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g09705 | ATPCNA1, PCNA1 | sliding clamp protein *(PCNA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_11143 | ATPCNA1, PCNA1 | sliding clamp protein (PCNA) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g11664 | ATPCNA1, PCNA1 | sliding clamp protein *(PCNA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g07886 | ATPCNA1, PCNA1 | sliding clamp protein *(PCNA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c4_11630V3.1 | ATPCNA1, PCNA1,... | proliferating cellular nuclear antigen 1 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26451 | No alias | sliding clamp protein *(PCNA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g12734 | ATPCNA1, PCNA1 | sliding clamp protein *(PCNA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023660_P001 | PCNA2, ATPCNA2,... | sliding clamp protein (PCNA) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| BP | GO:0006275 | regulation of DNA replication | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| No external refs found! |
