Aliases : PUB13, ATPUB13
Description : E3 ubiquitin ligase (PUB)
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G29340 | ATPUB17, PUB17 | plant U-box 17 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g026489 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g102535 | ATPUB17, PUB17 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g04770 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g05159 | PUB12, AtPUB12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02329 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g13982 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g15449 | PUB18, ATPUB18 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05074 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07604 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000295 | No alias | not classified & original description: CDS=1-2304 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0070.g036784 | PUB13, ATPUB13 | not classified & original description: CDS=1-531 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0110.g045492 | ATPUB17, PUB17 | not classified & original description: CDS=1-2295 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06960 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g31463 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.04G103500.1 | PUB13, ATPUB13,... | not classified & original description: pacid=50631830... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.19G008100.1 | PUB25, Ceric.19G008100 | not classified & original description: pacid=50576706... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.34G048100.1 | Ceric.34G048100 | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020943.20 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g01449 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35977 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g39000 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g01430 | PUB13, ATPUB13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06164 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01006481001 | PUB8, B80 | U-box domain-containing protein 8 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009347001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016225001 | PUB14, ATPUB14 | U-box domain-containing protein 14 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g01304.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g31758 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g14682 | ATPUB45, PUB45 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15817 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g17320 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g37794 | PUB13, ATPUB13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g03488 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24080 | No alias | E3 ubiquitin ligase *(PUB15) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo415326 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula | 0.06 | OrthoFinder output from all 47 species | |
| Solyc02g072080.1.1 | ATPUB17, PUB17,... | U-box domain-containing protein 17 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g088360.2.1 | Solyc12g088360 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07376 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g08558 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g07352 | ATPUB17, PUB17 | E3 ubiquiTin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036734_P001 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| No external refs found! |
